API

Note

External functions can be imported from other packages like scvi-tools and be displayed on your docs website. As an example, setup_anndata here is directly from scvi-tools.

Data

setup_anndata(adata[, batch_key, …])

Sets up AnnData object for models.

MyModel

MyModel(adata[, n_hidden, n_latent, n_layers])	Skeleton for an scvi-tools model.
MyPyroModel(adata[, n_hidden, n_latent, …])	Skeleton for a pyro version of a scvi-tools model.

MyModule

MyModule(n_input[, n_batch, n_hidden, …])	Skeleton Variational auto-encoder model.
MyPyroModule(n_input, n_latent, n_hidden, …)	Skeleton Variational auto-encoder Pyro model.